Phosphatase Screening Library

Phosphatases are enzymes that catalyze the dephosphorylation process by replacing a phosphate group in a substrate with a hydroxyl group from activation water. Protein phosphorylation is a key post-translational modification in the regulation of many cellular processes. Phosphatases and kinases help regulate protein phosphorylation homeostasis in cells. The role of phosphatases is the opposite of that of phosphorylases and kinases. They play an important role in signal transduction pathways and control a wide variety of cellular processes including cell cycle, proliferation and differentiation, metabolism, cell-cell interactions, etc. Based on substrate specificity and functional diversity, protein phosphatases can be divided into two superfamilies: protein serine/threonine phosphatases and protein tyrosine phosphatases. Ser/Thr phosphatases are metalloenzymes belonging to two major gene families called PPP (phosphoprotein phosphatases) and PPM (metal-dependent protein phosphatases), while protein tyrosine phosphatases (PTP) belong to a different class of enzymes that utilize a phosphocysteine phosphatase intermediate as part of their catalytic action.

BOC Sciences can design a novel phosphatase screening library to deliver about 2,700 potential phosphatase inhibitors for high-throughput screening (HTS).

Classical protein tyrosine phosphatase (PTP) family.  Figure 1. Classical protein tyrosine phosphatase (PTP) family. (Hojin, L.; et al. 2015)

Phosphatase Screening Library Design

  • Firstly, we have employed a 2D fingerprint similarity search against a reference set of compounds from multiple databases of bioactive molecules
  • Then, small molecules with similar compounds involved in the reference database are searched by utilizing the MDL public key
  • Finally, our teams use BOC Sciences internal filters to identify more than 2,100 drug-like screening compounds and 600 close analogs of known phosphatase binding agents

At BOC Sciences, the potency of the bioactive compounds have been confirmed for the following phosphatase-related targets:

  • Acid phosphatase (Class B, ACP1, Purple)
  • PH domain leucine-rich repeat-containing protein phosphatase 1
  • Alkaline phosphatase tissue-nonspecific isozyme
  • ADP-sugar pyrophosphatase
  • Myosin light chain phosphatase
  • Alkaline phosphatase placental-like
  • Alkaline phosphatase (tissue-nonspecific isozyme, placental-like, ALPL, intestinal alkaline phosphatase)
  • Phos Phosphatase Ahk4
  • Dual specificity phosphatase Cdc25A
  • Aspartate Phosphatase F
  • Phosphoethanolamine/phosphocholine phosphatase
  • Dual specificity phosphatase Cdc25B
  • CTD small phosphatase 1
  • Phosphotyrosine-protein phosphatase PTPB
  • Dual specificity protein phosphatase 3
  • dCTP pyrophosphatase (DCTPP1, ASMTL)
  • Tyrosine-protein phosphatase non-receptor type (SHP2, PTPN1, PTP1C, PTP2C, PTP4A3, LC-PTP, PTPN1, PTPN1, PTPN2, PTPN11, PTPN22, PTPN6, 70Z-PEP)
  • Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP
  • Dual Specificity Phosphatase (CDC25 type A/B/C, PTEN, DUSP3)
  • Protein-tyrosine phosphatase receptor type (PTPRA, PTPRC, PTPRD, PTPRE, PTPRF, PTPRO, PTPRS)
  • Intestinal alkaline phosphatase
  • Inositol monophosphatase
  • Protein-tyrosine phosphatase YopH
  • Low molecular weight phosphotyrosine protein phosphatase
  • Inositol-1-phosphatase
  • Pyridoxine 5'-phosphate phosphatase
  • PH domain leucine-rich repeat-containing protein phosphatase 1
  • Lipid-phosphate phosphatase
  • Serine/threonine-protein phosphatase (PP1, PP2A, PP5, PP2C Abi1, PP2C HAB1, PP2C PH domain, PP1 Regulatory Subunit 71)
  • Phosphoethanolamine/phosphocholine phosphatase
  • Low molecular weight phosphotyrosine protein phosphatase (ACP1, ets.)
  • Undecaprenyl pyrophosphate phosphatase
  • Phosphotyrosine-protein phosphatase PTPB
  • PH domain leucine-rich repeat-containing protein phosphatase 1
  • Myosin light chain phosphatase
  • Protein-tyrosine phosphatase 1B
  • Receptor-type tyrosine-protein phosphatase S
  • Phos Phosphatase Ahk4
  • Protein-tyrosine phosphatase 2C
  • Receptor-type tyrosine-protein phosphatase O
  • Protein-tyrosine phosphatase LC-PTP
  • Protein-tyrosine phosphatase LC-PTP

Schematic representation of approaches to identify PTP function and substrate.  Figure 2. Schematic representation of approaches to identify PTP function and substrate. (Hojin, L.; et al. 2015)

Phosphatase Screening Library Characteristics

  • High diversity over the screening set: mean Tanimoto > 0.85
  • Favorable physicochemical parameters and solubility requirements
  • No PAINS or toxic substances/unwanted functions: filtered by strict ‘Ro5-like’ physicochemical and most stringent in-house structural filters
  • Bioactivity and safety confirmed by preclinical studies and clinical trials
  • Structural diversity, medicinal activity, and cellular penetration
  • Structural document, IC50, and other chemical and biological data are provided
  • All compounds are continually updated
  • Compound cherry-picking service is provided

What We Deliver

  • Delivered within 2 weeks in any customer-preferred format
  • Powders, dry films or DMSO solutions formatted in vials, 96 or 384-well plates
  • All compounds have a minimum purity of 90% assessed by 1H NMR and HPLC
  • Analytical data is provided

BOC Sciences provides professional, rapid and high-quality services of Phosphatase Screening Library design at competitive prices for global customers. Personalized and customized services of Phosphatase Screening Library design can satisfy any innovative scientific study demands. Our clients have direct access to our staff and prompt feedback to their inquiries. If you are interested in our services, please contact us immediately!

Reference

  1. Hojin, L.; et al. Mining the function of protein tyrosine phosphatases in health and disease. Seminars in Cell & Developmental Biology. 2015. 37: 66-72.
Our mission is to provide clients with a professional chemical library design platform. Empowered by high-quality services and effective research solutions, we are committed to helping customers achieve effective and successful research goals.

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Services Based on the Chemical Library Design Platform

Services Based on the Chemical Library Design Platform

BOC Sciences has rich experience in working with global customers in custom library synthesis of compounds and generating small to medium-sized libraries of target compounds. Our knowledge in generating a large number of target molecules in a remarkably shorter time enables quick biological screenings for affinities. With the target properties in mind, we deliver target molecules, by applying our extensive knowledge in drug discovery.

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