ATPase Focused Library

ATPases, also known as adenosine triphosphatases, are a class of enzymes that catalyze the hydrolysis of adenosine triphosphate (ATP) into adenosine diphosphate (ADP) and phosphate ions. Currently, there are four types of ATPases (P, V, F and ABC types) that operate within biological membranes. The energy released during the catalytic hydrolysis of ATPases is used to catalyze other cellular reactions. Thus, ATPases are key enzymes involved in energy homeostasis and signal transduction. In addition, mutations in these proteins relate to many diseases ranging from cancer to those affecting the bones (osteoporosis), ears (hearing), eyes (macromolecular degeneration), heart (hypercholesterolemia/cardiac arrest), immune system (immune deficiency diseases), kidneys (nephrotoxicity), lungs (cystic fibrosis), pancreas (diabetes and cystic fibrosis), skin (Darier disease) and stomach (ulcers).

BOC Sciences has designed its proprietary ATPase focused screening library containing over 8,800 drug-like screening compounds.

ATPase copper  transporter A contributes to cisplatin resistance in breast cancer cells. Figure 1. ATPase copper transporter A contributes to cisplatin resistance in breast cancer cells. (Yu, Z.; et al. 2020)

Library Design

a. Firstly, 30,000 reference compounds with reported activity values below 11 uM are screened by employing a 2D fingerprint similarity search (85% Tanimoto similarity cut-off). Therefore, a set of over 5,000 structurally diverse screening compounds with potential ATPase inhibitory activity against different target types can be generated successfully

The following ATPases are selected as drug targets:

  • 26S proteasome non-ATPase regulatory subunit 14
  • ATPase family AAA domain-containing protein type 2 and 5
  • Cystic fibrosis transmembrane conductance regulator ATPase Activity
  • Katanin p60 ATPase-containing subunit A1
  • Multidrug resistance-associated protein 1 ATPase Activity
  • Potassium-transporting ATPase
  • Sodium/potassium-transporting ATPase
  • Transitional endoplasmic reticulum ATPase
  • V-type proton ATPase subunit c'

b. Then, our experienced experts use databases from different sources to filter the HTS compound collection against a reference set of 13,000 bioactive compounds from 127 ATPase-related assays

The list of targets selected in this reference set is shown below:

  • p97 ATPase
  • SV40 T antigen (inhibit the ATPase activity of Tag - tumor antigen)
  • Hsp70 protein (GST-tagged ATPase domain)
  • ATPase - based assay for small molecule DnaK Modulators targeting the beta-domain
  • Inhibitors of Dynein Mediated Cargo Transport on Microtubules
  • Sic1-GFP Fusion Protein
  • CS receptor on Na+-ATPase
  • Inhibition of V-ATPase activity in African green monkey COS7 cells
  • Inhibition of Escherichia coli RecA by ADP-linked fluorescent ATPase assay
  • RecA ATPase inhibitors
  • Saccharomyces cerevisiae V-ATPase subunit B
  • Na+/K+ ATPase (including inhibition of rat kidney Na+/K+ ATPase)
  • Inhibition or activation of verapamil-stimulated ATPase activity of P-glycoprotein
  • Inhibition of Escherichia coli 60 kD a chaperonin groEL I493C mutant ATPase activity
  • SecA ATPase
  • B2 subunit of vacuolar H+-ATPase (V-ATPase)
  • Pgp-ATPase activity
  • ATPase activity of Eg5
  • H+/K+ ATPase from pig gastric mucosa
  • cardiac SR-CA2+-pumping ATPase
  • Kinesin spindle protein (KSP)
  • Hsp90 ATPase activity
  • MRP1 ATPase activity
  • DNA gyrase B ATPase activity

c. Finally, approximately 3,800 potential ATPase inhibitors are selected using the 75% Tanimoto similarity

ATPase Focused Library Characteristics

  • No PAINS or toxic substances/unwanted functions: filtered by strict ‘Ro5-like’ physicochemical and most stringent in-house structural filters
  • All PAIN and reactive compounds are excluded from selection by internal filter applications
  • Confirmed bioactivity and safety via preclinical studies and clinical trials
  • Structural diversity, significant efficacy, and cellular penetration
  • All compounds are continually updated
  • Compound cherry-picking service is available

What We Deliver

  • Delivered within 2 weeks in any customer-preferred format
  • Powders, dry films or DMSO solutions formatted in vials, 96 or 384-well plates
  • All compounds have a minimum purity of 90% assessed by 1H NMR and HPLC
  • Analytical data is provided

BOC Sciences provides professional, rapid and high-quality services of ATPase Focused Library design at competitive prices for global customers. Personalized and customized services of ATPase Focused Library design can satisfy any innovative scientific study demands. Our clients have direct access to our staff and prompt feedback to their inquiries. If you are interested in our services, please contact us immediately!

Reference

  1. Yu, Z.; et al. ATPase copper transporter A, negatively regulated by miR8a, contributes to cisplatin resistance in breast cancer cells. Clinical and Translational Medicine. 2020. 10(1).
Our mission is to provide clients with a professional chemical library design platform. Empowered by high-quality services and effective research solutions, we are committed to helping customers achieve effective and successful research goals.

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Services Based on the Chemical Library Design Platform

Services Based on the Chemical Library Design Platform

BOC Sciences has rich experience in working with global customers in custom library synthesis of compounds and generating small to medium-sized libraries of target compounds. Our knowledge in generating a large number of target molecules in a remarkably shorter time enables quick biological screenings for affinities. With the target properties in mind, we deliver target molecules, by applying our extensive knowledge in drug discovery.

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